PAGXXI

The Twitter Highlights

  1. NOTE: Pls. share #PAGXXI content - highlighting or commenting on, but do not share in full detail, materials presented. ow.ly/gL2yD
  2. We understand the wifi has been slow & we have adjusted the system. Users of PAG XXI - syngenta should notice an increase in speed. #PAGXXI
  3. Buckler miss huge QTL effects with SNP chips. Have to sequence whole genomes #PAGXXI
  4. GL modern bison mtDNA are not diverse and do not reflect ancient bison variation #PAGXXI
  5. Where's the shuttle bus to the end of the #PAGXXI lunch queue?
  6. GW: in summery moleculo tech generates long (>5kb) accurate "reads" on illumina. #truestory #pagxxi Its so good illumina bought the company
  7. RIGHT NOW: Dr. Eujayl @USDA_ARS speaking on development of sugar beet genotyping chip altering WGS Poster W738 Towne #PAGXXI #PAG2013
  8. Take home message from GBS. < 10% of discovered snps usable/utilized in almost all cases..katie ..#PAGXXI
  9. ML: #Brassica whole #genome #triplication (#WGT) review of lit from 1996 to now; Lagercrantz & Lydiate 1996 , Parkin et al. 2005 #PAGXXI
  10. Isobel Parkin: Why need #Brassica #genome? Road map ti identify novel genes, develop SNP #markers, MAS, enhanced #traits#evolution #PAGXXI
  11. When life gives you lemons, use GMOD tools and make an awesome genomic resource! #PAGXXI #CitrusGenomeDatabase
  12. Loren Rieseberg Parallel genomic evolution, not speciation in sunflower #pagXXI
  13. Loren Rieseberg only half the parallelism explained by natural selection, recombination plays role, differs across chromosomes #pagXXI
  14. Rieseberg: Evolution (Fst) more repeatable in bigger regions (recombination/mutation rates likely important). #PAGXXI
  15. Cuomo: wheat rust genomes are large, polymorphic and highly repetitive #pagxxi
  16. Szabo: goals are define global genetic landscape of Pgt, and develop rapid diagnostic methods #pagxxi
  17. Szabo: phylogeny based on WGS: 6 lineages, UG99 stands on its own #pagxxi
  18. Szabo discussing SNP chips. Now I'm hungry...#pagxxi
  19. Szabo: Number 1 challenge is samples. Need better representation of global pgt population, getting live collections is difficult #pagxxi
  20. Yung-Fen Huang #Oats Genotyping by sequencing 120k SNPs in the CORE project on worldwide diversity lines and parental mapping lines #pagxxi
  21. YH: Diverse panel does not give most polymorphic markers. Winter Oat might be more diverse that Spring Oat based upon panel #pagxxi
  22. YH: Using GWAS to evaluate genomic selection in oat over breeding cycles to increase breeding efficiency #pagxxi
  23. have you noticed how many people at #PAGXXI have gone back to old overlap assemblers cos of the longer reads. Not a de buijn graph in sight
  24. uergen Gadau: 100 million years of social evolution. Num species specific genes is correlated with distance and number of relatives. #pagxxi

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Luigi Guarino

Discussing the diversity of crops, livestock, microbes, wild relatives... -- agrobiodiversity

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